Berkeley Lab

ENIGMA’s Fangchao Song is Berkley Lab SLAM Finalist!

Fanchao Song of Arkin Lab was selected to compete … [Read more...]

Precisely Quantifying Ecological Processes in Shaping Subsurface Communities

          & … [Read more...]

Sulfonate utilization by Desulfovibrio may expand ecological niches

Day, L.A.; K.B. De León, M.L. Kempher, J. Zhou, … [Read more...]

ENIGMA publication highlighted by DOE

https://www.energy.gov/science/ber/articles/microbe … [Read more...]

ENIGMA teamwork is featured in Elements

A highly collaborative Discovery project combines … [Read more...]

Adapting METLIN offers new metabolite identification opportunities

Domingo-Almenara, X.; J. R. Montenegro-Burke, C. … [Read more...]

DuBSEQ functional characterization Nature Communications

ENIGMA researchers release DuBSEQ, a tool for … [Read more...]

David Stahl Honored by Seattle Aquarium

We know David Stahl as a Principal Investigator in … [Read more...]

Jizhong Zhou Honored with 2019 ASM Award for Environmental Research

Jizhong Zhou, Ph.D. (University of Oklahoma, in … [Read more...]

ENIGMA’s Lauren Lui is Berkley Lab SLAM Finalist!

Lauren Lui of Arkin Lab is a Finalist Selected to … [Read more...]

ENIGMA’s Romy Chakraborty honored at “Women @ the Lab”

Romy Chakraborty is honored by Berkeley Lab … [Read more...]

Mike Adams wins 2018 DuPont Industrial Biosciences Award in Applied and Environmental Microbiology

https://www.asm.org/Academy/Academy ENIGMA … [Read more...]

ENIGMA Team Anchors Collaboration to Accelerate Experiment-based Gene Function Assignments

As part of a large scale collaboration, a diverse … [Read more...]

Leslie Day ENIGMA undergrad Honorable mention for poster Mizzou Life Sciences Week 2018

Leslie, a Senior in Biochemistry working in the … [Read more...]

Erica Majumder wins best overall poster at the International Symposium on Microbial Sulfur Metabolism

ENIGMA postdoc Erica Majumder's poster "Beyond … [Read more...]

Parts-Based Strategy Speeds Up Gene Function Annotation

Hualan Liu an ENIGMA Researcher in Adam … [Read more...]

Most Free-Living Bacteria Likely Make All 20 Amino Acids

ENIGMA researchers at Lawrence Berkeley Lab and … [Read more...]

Rapidly Moving New Bacteria to Model Organism Status

ENIGMA researchers describe our proposed workflow … [Read more...]

Dual Barcoded Shotgun Expression Library Sequencing (Dub-seq) wins R&D100 Award

ENIGMA's Vivek Mutalik, Adam Deutschbauer, Pavel … [Read more...]

Key Cellular Components Persist in Bacteria Although Response to Salt Stress Changes

ENIGMA researchers at University of Oklahoma, … [Read more...]

New ENIGMA Study Finds Anaerobic Nitrate-Reducing Conditions Influence Metal Toxicity

Prior observations of chromium (Cr[VI]) and … [Read more...]

Memory response and groundwater movement is relative to microbial communities and geochemistry

Hydraulic conductivity and effective porosity are … [Read more...]

PaperBLAST: A Text Mining Tool Find Publications About A Protein Or Its Homologs

ENIGMA researchers are excited to announce a new … [Read more...]

Rare environmental isolates found at ENIGMA field site

ENIGMA researcher Romy Chakraborty announced today … [Read more...]

Robustness of a model microbial community emerges from population structure among single cells of a clonal population

Robustness of a model microbial community emerges … [Read more...]

ENIGMA Researchers Uncover Factors in Microbial Community Collapse

Serdar Turkarslan, a Senior Research Scientist at … [Read more...]

Complete genome sequence of Pseudomonas stutzeri strain RCH2

Dr Chakraborty and a team of ENIGMA researchers … [Read more...]

Temporal Dynamics of In-Field Bioreactor Populations Reflect the Groundwater System and Respond Predictably to Perturbation

  A collaboration of researchers at … [Read more...]

Predicting metabolic properties using dynamic substrate preference

Exometabolomic profiling was used to examine the … [Read more...]

Metabolizing Data in the Cloud

ENIGMA researchers at Scripps Research Institute … [Read more...]

Uranium binding complex a potential tool for environmental sequestration of uranium

Widespread uranium contamination from industrial … [Read more...]

Rapid Detection of Microbial Cell Abundance in Aquatic Systems

ENIGMA post doctoral fellow developed the … [Read more...]

Digital Droplet Multiple Displacement Amplification

The ddMDA technique enabled significantly lower … [Read more...]

Nitrite Reduction Assay for Whole Pseudomonas Cells

ENIGMA researchers  at University of Georgia … [Read more...]

Stable protein interactome of the model sulfate reducing bacterium Desulfovibrio vulgaris Hildenborough

First demonstration of a highly accurate, … [Read more...]

Preferential oxidation of microbial-mediated reduced sulfur by nitrate limits the in situ mobility of uranium

Reoxidation and mobilization of previously reduced … [Read more...]

Post Doc Lauren Lui profiled by Berkeley Lab for her Public Service and contribution to Women in Science

During March- Women’s History Month, Berkeley Lab … [Read more...]

Benchmark properties for highly accurate bacterial protein interactions

SUMMARY Numerous affinity purification – … [Read more...]

Are free-living bacteria optimized by natural selection?

Free-living bacteria are usually thought to have … [Read more...]

Comparative metagenomics reveals impact of contaminants on groundwater microbiomes

Significant portions of natural groundwater … [Read more...]

Andrea Rocha featured in Top 50 Women “Latinas in Information Technology of Hispanic Engineer and IT” magazine

ENIGMA Post Doc Andrea Rocha one of top 50 women … [Read more...]

Andrea Rocha is featured in DOE’s online Women @ Energy Series

Andrea Rocha is featured in DOE’s online Women @ … [Read more...]

David Stahl selected as EMSL Chief Scientist

David Stahl, an environmental microbiologist at … [Read more...]

Potential Role of Acetyl-CoA Synthetase (acs) and Malate Dehydrogenase (mae) in the Evolution of the Acetate Switch in Bacteria and Archaea

Elliott P. Barnhart1,2,3, Marcella A. McClure1, … [Read more...]

Differences in diversity between extraction techniques

ENIGMA researchers at University of Tennessee … [Read more...]

Visiting STEM students gain insight to microbial metabolomics

In support of the Cal State University East Bay … [Read more...]

Jizhong Joe Zhou Recipient of DOE’s Highest Scientific Honor- The Lawrence Award

ENIGMA's Joe Jizhong Zhou, a Professor at … [Read more...]

Bacterial Communities As Precise Biosensors Of Environmental Damage

ENIGMA scientists show that DNA from natural … [Read more...]

ENIGMA researcher Michela Catena is a Fulbright Scholar this fall!

ENIGMA student Michela Catena has been selected … [Read more...]

Trent Northen is “Science Guy”!

ENIGMA's Trent Northen is 'Science Guy' at Buena … [Read more...]

Lara Rajeev Stars in video demonstrating DNA-affinity-purified chip (DAP-chip) method to determine gene targets for bacterial two component regulatory systems

Rajeev, L., E. G. Luning and A. Mukhopadhyay … [Read more...]

New Community Leadership! Aindrila Mukhopadhyay

ENIGMA's Aindrila Mukhopadhyay in ASM leadership … [Read more...]

Metallomics of Two Microorganisms Featured on Metallomics Blog

Metallomics of Two Microorganisms Relevant to … [Read more...]

Judy Wall Recognized With 2014 Faculty Achievement Award

Congratulations Judy! You are inspiring and … [Read more...]

Exploring the Role of CheA3 in Desulfovibrio vulgaris Hildenborough Motility Was One of the Most Viewed Frontiers in Microbiology Research Articles this March

Our paper has been featured in the Frontiers top … [Read more...]

Adam Arkin Recipient of DOE’s Highest Scientific Honor- The Lawrence Award

"Adam Arkin, director of Berkeley Lab’s Physical … [Read more...]

Andrea Rocha Featured Post Doc at ORAU

Since May 2012, Rocha has been a participant in … [Read more...]

Environmental Microbiology Team Demonstrate the Importance and Dynamic Behavior of Stochastic Processes in Controlling the Succession of Microbial Communities

One of the ENIGMA goals is to map genotypes to … [Read more...]

Montana State Team Overcomes Challenges, Proves That Microbes Swim to Hydrogen Gas

Knowledge of taxis (directed swimming) in the … [Read more...]

Terry Hazen Inducted as AAAS Fellow

Please join me in congratulating our very own … [Read more...]

Judy Wall Awarded Curators’ Professorship in Biochemistry at University of Missouri

Judy Wall has been awarded the Curators’ … [Read more...]

Publication Citation Report and Top Ten Highly Cited

Citation analysis performed June 13, 2013 at Web … [Read more...]

Indirect and Suboptimal Control of Gene Expression is Widespread in Bacteria

It is generally thought that bacteria regulate … [Read more...]

Metabolic Footprinting of Mutant Libraries to Map Metabolite Utilization to Genotype

The discrepancy between the pace of sequencing and … [Read more...]

Zhou Wins OU Research Award

Joe Zhou wins University of Oklahoma Vice … [Read more...]

Genome Announcement of Pelosinus fermentans

Pelosinus fermentans JBW45 is an anaerobic, … [Read more...]

Community Leadership! Steve Brown

ENIGMA's Steve Brown in ASM leadership … [Read more...]

Metallochaperones Regulate Intracellular Copper Levels

Copper (Cu) is an important enzyme co-factor that … [Read more...]

David Stahl Elected to National Academy of Engineering

Congratulations to ENIGMA's David Stahl on this … [Read more...]

Liquid Chromatography Quadrupole Time-of-Flight Mass Spectrometry Characterization of Metabolites Guided by the METLIN Database

Untargeted metabolomics provides a comprehensive … [Read more...]

A Large-Scale Evaluation of Computational Protein Function Prediction

Automated annotation of protein function is … [Read more...]

ENIGMA Metabolic Footprinting Publication Recommended by Faculty of 1000

The discrepancy between the pace of sequencing and … [Read more...]

Metabolomics: Sifting Through Complex Samples

Review article of advances in Metabolomics about … [Read more...]